Turakhia Lab is looking for scientifically curious and highly motivated PhD students and postdoctoral researchers interested in parallel computation and GPU programming, AI development, and computer architecture for bioinformatics applications. We develop algorithms, AI methods, and domain-specific hardware accelerators that enable faster and cheaper progress in biology and medicine.

Prospective PhD students and postdoctoral researchers with interests and prior experience in one or more of the following areas are encouraged to apply:

• Parallel computation, high-performance computing (HPC), and GPU programming
• AI / machine learning development for bioinformatics
• Computational genomics and bioinformatics algorithms
• Computer architecture, hardware-software co-design, and domain-specific accelerators
• FPGA computing and VLSI design for biomedical applications

Genomic or other biological data is outpacing conventional computing, creating opportunities for breakthroughs at the intersection of computing, AI, and biology.

• Research impact. We make large-scale genomic analysis faster and more accessible, enabling researchers to study genetic variation, reconstruct evolutionary histories, and track infectious pathogens at unprecedented scales. Our tools have been deployed in global pathogen surveillance efforts and in major scientific efforts such as the Vertebrate Genomes Project, connecting advances in computing to real-world biological discovery and public health applications.
• Publications and visibility. Our publications have appeared in Nature, Nature Genetics, Nature Computational Science, PNAS, ISMB, Bioinformatics, and HPCA. Our research has been featured in several media and scientific outlets.
• Industry experience. PhD students in the lab often get to pursue industry internships, with recent examples at companies like AMD Research, AMD, Analog Devices, Intel, and KLA Corporation.
• Close PI mentorship. Our lab size allows Prof. Turakhia to work closely with each student and provide guidance on research direction, technical challenges, writing, and career development.
• San Diego. San Diego offers a thriving tech and biotech ecosystem, easy access to beaches, and great weather year-round for outdoor activities.

Turakhia Lab recruits PhD students through the Electrical and Computer Engineering (ECE), Computer Science and Engineering (CSE), and Bioinformatics and Systems Biology (BISB) programs at University of California San Diego (UCSD). Prospective PhD students, please review the application instructions and deadlines for the program that best matches your background and research interests:

• ECE graduate admissions: Apply to the Computer Engineering (EC79) specialization.
• CSE graduate admissions
• BISB graduate admissions and application instructions

Please mention Prof. Turakhia in your application. Once your application is completed, please also send Prof. Turakhia an email with your details at yturakhia@ucsd.edu.

Graduating PhD students who are looking for postdoctoral opportunities, please email yturakhia@ucsd.edu with your CV and a brief description of your research background and interests.