• assign_qry_local_affine() : initial.h
• assign_qry_local_linear() : initial.h
• assign_ref_local_affine() : initial.h
• assign_ref_local_linear() : initial.h
• assign_value_global() : initial.h
• assign_value_local() : initial.h
• DutChunkComputeArr() : components.h
• DutChunkComputeBlock() : components.h
• DutExpandCompute() : components.h
• DutExpandComputeBlock() : components.h
• fixed_banding_global_linear_solution() : solutions.h
• fprint_matrix() : solutions.h
• global_affine_solution() : solutions.h
• global_dtw_solution() : solutions.h
• global_linear_solution() : solutions.h
• global_two_piece_affine_solution() : solutions.h
• local_affine_solution() : solutions.h
• local_linear_solution() : solutions.h
• local_two_piece_affine_solution() : solutions.h
• overlap_linear_prefix_suffix_solution() : solutions.h
• overlap_linear_suffix_prefix_solution() : solutions.h
• print_matrix() : solutions.h
• print_vector() : solutions.h
• profile_alignment_solution() : solutions.h
• semi_global_linear_long_short_solution() : solutions.h
• semi_global_linear_short_long_solution() : solutions.h
• seq_align_multiple_static() : seq_align_multiple.h
• viterbi_solution() : solution_viterbi.h