| Sep, 2023 |
Sumit Walia passes his PhD preliminary exam. Congratulations, Sumit!
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| Sep, 2023 |
RIVET manuscript on SARS-CoV-2 recombination is published in Bioinformatics. Congratulations, Kyle Smith and Cheng Ye for contributing to this study!
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| Sep, 2023 |
Yatish named MIT Technology Review Innovator Under 35 in computing for vital contributions to SARS-CoV-2 phylogenetics during the COVID-19 pandemic. Read press coverage by UC San Diego Today.
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| Sep, 2023 |
Anshu and Pranav wraps their summer internship at Analog devices and Intel, respectively.
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| Sep, 2023 |
Max wraps up his summer research internship with the lab. Congratulations Max!
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| Sep, 2023 |
Yu-Hsiang Tseng (PhD, ECE) joins the lab! Welcome Yu-Hsiang!
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| Sep, 2023 |
Paper accepted in HPCA’24, Congratulations to Sumit, Cheng, Arkid, and Dhruvi!
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| Aug, 2023 |
Max Doblas, from the Barcelona Supercomputing Center (BSC) joins the lab as a visiting summer research intern. Welcome Max!
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| Aug, 2023 |
Carolyn Zhang and Girish Krishnan present their summer research project on wastewater-based epidemiology at the ECE Summer Research Internship Program (SRIP) conference.
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| Jul, 2023 |
Kyle Smith attends ISMB 2023 in Lyon, France to present work on RIVET.
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| Jun, 2023 |
Turakhia Lab has fun day trip whale watching off the coast of San Diego!
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| Jun, 2023 |
Kyle Smith attends the Undergraduate Architecture Mentoring Workshop (uArch) in Orlando Florida, in conjunction with ISCA 2023.
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| Jun, 2023 |
Yatish organised the 5th workshop on Accelerator Architecure in computational Biology and Bioinformatics (AACBB)’23, held in conjunction with ISCA’23.
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| May, 2023 |
Yatish won the Hellman Fellowship, Congratulations, Yatish!.
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| Apr, 2023 |
Carolyn Zhang and Girish Krishnan join the lab. Welcome Carolyn and Girish!
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| Mar, 2023 |
Yatish won the Amazon Research Award, Congratulations, Yatish!
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| Jan, 2023 |
Pranav Gangwar (PhD, ECE) and Jason Liang (UG, ECE) join the lab. Welcome, Pranav and Jason!
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| Dec, 2022 |
FA’22 Quarter End Lab Dinner
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| Nov, 2022 |
Anshu Gupta (PhD, CSE) joins the lab. Welcome, Anshu!
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| Oct, 2022 |
Yatish gives a keynote talk at the NGS 2022 conference organized by the American Society for Microbiology.
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| Sep, 2022 |
Turakhia Lab joins the SEARCH team which is tracking the spread of SARS-CoV-2 in San Diego.
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| Sep, 2022 |
Turakhia Lab welcomes new members Arkid Bera, Yingqi Cao, Debabrata Chaudhury, Dhruvi Lodhavia and Harsh Motwani to the lab.
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| Sep, 2022 |
Yatish gives a talk at the Massachusetts General Hospital and a chalk talk at the UCSD Undergraduate Bioinformatics Club (UBIC).
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| Aug, 2022 |
RIPPLES manuscript on SARS-CoV-2 recombination is published in Nature. Read press release. Congratulations, Cheng Ye and Kyle Smith, for contributing to this study!
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| Jul, 2022 |
Yatish presents at phyloseminar. Watch recording.
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| Jun, 2022 |
Undergraduate researchers Arthur Lu, Crystal Zou and Kevin Lie join the lab. Welcome, Arthur, Crystal and Kevin!
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| Jun, 2022 |
Alireza presents his work at AACBB 2022, held in conjunction with ISCA 2022.
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| Jun, 2022 |
High school interns Vidhi Kulkarnia and Ronnie Volman join the lab for Summer 2022. Welcome, Vidhi and Ronnie!
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| Jun, 2022 |
matOptimize is published in Bioinformatics! Read press coverage. Congratulations, Cheng et al.!
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| May, 2022 |
Yatish presents an invited talk on “Pandemic-scale Phylogenetics” at the HiCOMB 2022 workshop
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| May, 2022 |
Cheng Ye wins ECE best undergraduate research award 2022! Read Cheng’s story here. Congratulations, Cheng!
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| Apr, 2022 |
Yatish starts teaching ECE 111 Advanced Digital Design Project
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| Apr, 2022 |
Undergraduate researchers Carol Bao and Xuan Wang join the lab for Spring and Summer internships
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| Mar, 2022 |
Turakhia Lab has a fun outing in Catalina Island during the Spring break!
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| Jan, 2022 |
Alireza Mohammadidoost (PhD, ECE) joins the lab. Welcome, Alireza!
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| Jan, 2022 |
Yatish starts teaching the graduate course ECE 284 Parallel Computing in Bioinformatics
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| Jan, 2022 |
Cheng Ye et al. release a preprint on matOptimize a parallel tree optimization tool capable of handling million-scale SARS-CoV-2 phylogenies
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| Dec, 2021 |
Cheng Ye et al. release a preprint on pandemic-scale phylogenetics, which is covered by The Medical News
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| Nov, 2021 |
Angie Hinrichs (UCSC) highlights UShER and matOptimize at the StaPH-B meeting
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| Nov, 2021 |
Yatish gives a talk on “Pandemic-scale Phylogenetics” in the CSE 290 class at UCSD
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| Nov, 2021 |
Yatish is quoted by The Guardian on the Omicron variant
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| Sep, 2021 |
Devika and Shoh wrap up their summer research internships. Congratulations!
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| Sep, 2021 |
RIPPLES and UShER are featured in an article in The Scientist
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| Sep, 2021 |
Sumit Walia (PhD, ECE) and Kyle Smith (UG, Bioinformatics) join the lab. Welcome, Sumit and Kyle!
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| Sep, 2021 |
Manuscript on matUtlils and the UCSC SARS-CoV-2 tree database published in Molecular Biology and Evolution (MBE)
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| Aug, 2021 |
A preprint on RIPPLES, with contributions from Yatish (co-first author) and Cheng, is posted on bioRxiv
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| Aug, 2021 |
The Medical News features our work on SARS-CoV-2 recombination
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| Aug, 2021 |
Yatish provides a tutorial on UShER at the Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME 2021)
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| Jul, 2021 |
Yatish officially starts at UCSD as an Assistant Professor
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| Jul, 2021 |
Yatish interviews with The Wired on the Delta variant
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| May, 2021 |
Manuscript on UShER published in Nature Genetics
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| May, 2021 |
UShER is featured by GenomeWeb, UCSC NewsCenter, MedicalXPress, and several other media outlets
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| Apr, 2021 |
Yatish contributes to a manuscript published in Genome Biology and Evoution (GBE)
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| Apr, 2021 |
UCSC makes an announcement about the UShER-based SARS-CoV-2 tree that just surpassed 1M genomes
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| Apr, 2021 |
Yatish gives a seminar talk on UShER for the BME 281C class at UCSC
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| Apr, 2021 |
Zihao Kong joins the lab for research
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| Apr, 2021 |
Devika Torvi and Shoh Mollenkamp join the lab for Spring and Summer internships
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| Jan, 2021 |
Cheng Ye (UG, ECE) joined the lab
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