Functions
map< string, std::vector < string > >	read_sequences_from_json (string file_path)
	Read form a json file storing the sequences in the format of "specie_name": "dna string". More...

std::vector< std::string >	readFasta (const std::string &filePath)

template<typename T , size_t M, size_t N>
void	SwitchDimension (T(&src)[M][N], T(&dst)[N][M])

Function Documentation

map<string, std::vector<string> > HostUtils::IO::read_sequences_from_json ( string file_path )

Read form a json file storing the sequences in the format of "specie_name": "dna string".

Parameters

file_path

Returns: map<string, std::vector<string>> : The map has two entries. The first entry is "specie_names": vector<string> The second entry is "sequences": vector<string>

std::vector<std::string> HostUtils::IO::readFasta ( const std::string & filePath )

template<typename T , size_t M, size_t N>

void HostUtils::IO::SwitchDimension	(	T(&)	src[M][N],
		T(&)	dst[N][M]
	)

Functions