The namespace for the customized function related to the traceback. More...

Functions
void	StateMapping (tbp_t tbp, TB_STATE &state, tbr_t &navigation)
	Map the current step's state and the traceback pointer to the next state and one of the Insertion, Deletion, Match/Mismatch, or Stop directions. More...

void	StateInit (tbp_t tbp, TB_STATE &state)
	Initialize the initial traceback state based on the initial traceback pointer. More...

Detailed Description

The namespace for the customized function related to the traceback.

Function Documentation

void ALIGN_TYPE::Traceback::StateInit	(	tbp_t	tbp,
		TB_STATE &	state
	)

Initialize the initial traceback state based on the initial traceback pointer.

Parameters

tbp
state

void ALIGN_TYPE::Traceback::StateMapping	(	tbp_t	tbp,
		TB_STATE &	state,
		tbr_t &	navigation
	)

Map the current step's state and the traceback pointer to the next state and one of the Insertion, Deletion, Match/Mismatch, or Stop directions.

Parameters